yozK [2019-09-17 10:21:14]

N-terminal fragment of the Y family DNA polymerase [protein|A04F698C8836E84991BC875BCB7B1460D8E74A8E|YozK]-[protein|ED0A85A8A5FCD12C99507EB033F88586521A7C47|YobH]

locus: BSU_18940

pI: 8.20

mw: 12.84 kDa

protein length: 115 aa

gene length: 349 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.6|DNA repair/ recombination/ based on similarity]

The protein

Protein family

• [SW|DNA polymerase type-Y family] (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|94F2146AC6998CC77CD2E86CE8BE8DC98AEBB9CD|yozL]-[gene|A04F698C8836E84991BC875BCB7B1460D8E74A8E|yozK]-[gene|ED0A85A8A5FCD12C99507EB033F88586521A7C47|yobH]
  description: [Pubmed|16267290]

  regulatory mechanism

  • [protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]: repression, [Pubmed|16267290], in [regulon|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA regulon]

  regulation

  • expression during spore [SW|germination] is strongly reduced under conditions of osmotic stress [Pubmed|27766092]

Biological materials

Mutant

• MGNA-B409 (yozK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1408 NBRP B. subtilis, Japan]
• BKE18940 ([gene|A04F698C8836E84991BC875BCB7B1460D8E74A8E|yozK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATTCTCACGTGGAAATTGTG, downstream forward: _UP4_TAATCTTTTTTAGATGCAGG
• BKK18940 ([gene|A04F698C8836E84991BC875BCB7B1460D8E74A8E|yozK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATTCTCACGTGGAAATTGTG, downstream forward: _UP4_TAATCTTTTTTAGATGCAGG

References

• 16267290,27766092,30916324